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Capillary Sequencing
* Samples containing Covid-19 or influenza viruses are not to be accepted.
As we currently produce oligos to be used in PCR test kits for [SARS-CoV-2] and [Influenza A/B virus], we do not accept nucleic acid samples which may become a template for such oligos. Thank you for your understanding.
We provide high-quality DNA sequencing using the Sanger method, offering rapid and cost-effective solutions. Our skilled staff ensures reliable data and can handle difficult sequences by optimizing conditions. Our diverse services accelerate your research and development.
Send us your template DNA and primers, and we will provide you with sequencing data.
- Pre-mix
- One-pass
- Full
Analyze long DNA sequences step-by-step using primer walking.
- Primer Walking
Additional services related to pre-sequencing processing.
- DNA Extraction
- Primer Design/Synthesis
- PCR Amplification
- PCR Product Purification
DNA Sequencing
We sequence the DNA samples you send us.
Perform a single cycle sequencing reaction, and deliver the data.
- Work Process
- Sequencing Reaction
Sequencer Run
Data Delivery - Reagents
- BigDye Terminator v3.1
- Sequencer
- 3730xl DNA Analyzer
- Average sequencing length
- approx. 500 – 700 bases
(depending on sample quality)
Analysis Plan
Pre-mix
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One-pass
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Full
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✓ Low-cost | ✓ No sample preparation required | ✓ Sample QC and re-analysis guarantee |
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One-off service for template and primer mixing samples. |
One-off service for templates and primers to be sent separately. |
Full service including sample QC and re-sequencing. |
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Price(1 tube)
Order Unit: 1 seq
|
1,500 JPY / 1 tube | 2,000 JPY / 1 tube | 3,500 JPY / 1 tube | |
Sample QC
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– | Only available for orders of 1 tube. |
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Sample preparation
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– | Universal primers available. |
Universal primers available. |
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Sequencing
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Run Time:1hr |
Run Time:1hr |
Run Time:2hr |
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Re-analysis
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– | – | ||
Discounted Pricing for Multiple Samples | ||||
8-Tube Strip
Order Unit: 8 seq
|
5,600 JPY / 8-Tube Strip 700 JPY/analysis |
12,000 JPY / 8-Tube Strip 1,500 JPY/analysis |
Full-service orders are available only for single-tube analyses. | |
0.5 Plate
Order Unit: 48 seq
|
33,600 JPY / 0.5 Plate 700 JPY/analysis |
43,200 JPY / 0.5 Plate 900 JPY/analysis |
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1 Plate
(1-9 Plates)
Order Unit: 96 seq
|
44,160 JPY / 1 Plate 460 JPY/analysis |
52,800 JPY / 1 Plate 550 JPY/analysis |
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1 Plate
(10+ Plates)
Order Unit: 96 seq
|
41,280 JPY / 1 Plate 430 JPY/analysis |
48,000 JPY / 1 Plate 500 JPY/analysis |
- * Prices are exclusive of tax.
- * Prices listed are for single-sequence (single-strand) analysis.
- * If the order quantity is below the specified unit, the full unit price will be charged.
- – Pre-mix, One-pass 8-strip, and One-pass plate do not include sample QC. The samples are used as provided, which may affect results if concentrations are not met.
- – For difficult sequences like GC rich or high-order structures, please note this in the order form.
- – Re-sequencing for poor data quality due to other causes will be treated as a new order. Please note that no investigation of causes is included in the service.
Turnaround Times
- * Turnaround time is calculated from the day the sample arrives as “Day 0”. Please note that the delivery time calculation is based on business days and does not include weekends and public holidays.
- * Same-day sample receipt is available until 3:00 PM. Samples received after 3:00 PM will be processed the next business day.
- * Turnaround times may vary depending on the order details and workload. Additionally, re-sequencing may require additional time. Please be aware of these factors.
Delivery
Results are provided via web download. A URL will be emailed when data is ready.
Delivered Data |
・Sequence Data (.txt) ・Raw Data (.ab1) |
- * Data is deleted from the server 3 months after delivery.
Required for Analysis
DNA Template and Sequencing Primer |
Plasmid (450 – 900ng) or PCR product (appropriate amount for amplicon size) and Sequencing Primer (10pmol) mixed in 20μL sterile water |
Order Form |
Download the order form for your desired analysis unit and fill it out. |
DNA Template |
Plasmid (Conc. 100 – 300ng/μL, 20+ μL) or PCR product (Conc. 10 – 50ng/μL, 20+ μL) |
Sequencing Primer |
Conc. 3.2μM (10+ μL) Universal primers are available on request. |
Order Form |
Download the order form for your desired analysis unit and fill it out. |
- * PCR products should be purified. Details on purification methods and optional sample purification services are provided.
- * We recommend agarose gel electrophoresis for concentration measurement and photos for reaction condition selection.
Primer Usage for One-pass 8-Strip / Plate
- – Up to 2 primers per 8-strip or plate. For 3+ primers, prepare a primer plate aligned with sample layout.
- – For 3+ primers, prepare a primer plate aligned with sample layout. For detailed instructions on preparing primer plates, please refer to Preparation of Primer Plates.
Sample Preparation Guide Order Procedure
Additional Analysis
If you wish to perform additional analysis on the same sample using the One-Pass or Full Service, it is possible to reanalyze the sample you have already sent.
Order Process
- ●Confirm sample amount for additional analysis.
- ●Download and complete the appropriate order form from our website. Create a new order form and mark “Additional Analysis” in the notes.
- ●Email the form to seq@hssnet.co.jp
Order Period
Samples are stored for 3 business days after analysis completion.
Order within this period for additional analysis.